Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs7761668 chr6:52935032 G/A 9.7E-12 482 31.27 31.07 19.43 KM Plot
PRAD rs77630070 chr6:7196323 G/T 8.63E-5 488 32.42 27.82 26.95 KM Plot
PRAD rs77688577 chr6:43328629 A/G 5.07E-10 485 31.27 28.57 44.3 KM Plot
PRAD rs77693675 chr7:135142402 T/C 1.76E-9 494 30.77 32.4 3.03 KM Plot
PRAD rs7773 chr16:85741257 C/G 1.15E-5 470 32.18 28.77 25.87 KM Plot
PRAD rs77752825 chr16:58044594 C/T 2.22E-5 486 30.77 31.8 44.3 KM Plot
PRAD rs77765875 chr11:129982130 A/G 1.96E-6 494 30.93 31.3 22.8 KM Plot
PRAD rs7779374 chr7:135069311 A/G 1.74E-9 493 30.8 31.4 3.03 KM Plot
PRAD rs7780028 chr7:135092556 A/G 2.09E-9 491 30.8 31.33 3.03 KM Plot
PRAD rs7780345 chr7:135137731 T/C 2.02E-9 492 30.77 32.4 3.03 KM Plot
PRAD rs77819442 chr7:135072552 C/T 1.81E-9 493 30.9 31.33 3.03 KM Plot
PRAD rs77828848 chr4:187811070 A/G 1.97E-6 484 31.18 28.57 26.8 KM Plot
PRAD rs7783976 chr7:135152783 G/A 1.9E-9 492 30.73 32.52 3.03 KM Plot
PRAD rs7784521 chr7:6776650 G/A 3.55E-5 491 31 30.23 35.28 KM Plot
PRAD rs7785527 chr7:135063685 C/T 1.8E-9 492 30.8 31.9 3.03 KM Plot